Erik Breslmayr – Medium

Erik Breslmayr

Change spell check settings for Miro Desktop App on Windows

Disable or change language for Miro spell check

1 min readNov 9, 2021

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Change spell check settings for Miro Desktop App on Windows

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Erik Breslmayr

Multi protein pH-profile surface charge maps

In a lot of scientific papers visualization of surface charges or surface electrostatics is a common feature for the interpretation of…

4 min readNov 5, 2021

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Erik Breslmayr

Echem2csv for processing Echem Data

Cyclic voltamograms (CV) are mostly copied to text files by simply clicking copy&paste, which is a easy way to get the data out of the…

2 min readApr 23, 2021

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Echem2csv for processing Echem Data

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Erik Breslmayr

Visualise surface charges of your protein 3D structure

To generate a charge-based surface model of your protein, three different programs are needed: 1) pdb2pqr, which calculates, based on the…

4 min readFeb 11, 2021

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Surface charges of a protein at two different pH’s. Colour ramp from blue to red, reflects negative to positive charge.

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Erik Breslmayr

Combine GROMOS and GROMACS Software packages

GROMOS is a software package to setup and run Molecular Dynamics Simulations. Gromos is more known for its force fields, than for running…

2 min readFeb 7, 2021

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Gromos and Gromacs together to combine both strengths.

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Erik Breslmayr

Installing pre-compiled APBS for electrostatic surface and PDB2PQR for protonation state…

How to get APBS and PDB2PQR running

3 min readNov 26, 2020

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Installing pre-compiled APBS for electrostatic surface and PDB2PQR for protonation state…

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Erik Breslmayr

Reducing data usage while using zoom for participants

This article should give a short overview of how to adjust the data usage while participating in a Zoom meeting. View settings and window…

3 min readNov 22, 2020

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Reducing data usage while using zoom for participants

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Erik Breslmayr

ProtParam standalone

“ProtParam” is a tool available as web service for calculation of Protein parameters, such as Molecular weight, Extinction coefficient, ……

3 min readAug 28, 2020

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ProtParamOnline

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Erik Breslmayr

Gromacs on Windows10

WSL under Windows10

3 min readAug 25, 2020

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Source: https://howtoremove.guide/ubuntu-on-windows-10/

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Erik Breslmayr

Erik Breslmayr

During my PhD, I worked in the field of bioinformatics (protein modelling/simulation). Now, I want to share my experience with you.

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